Dr. Schooley Home


Northeastern State University, Broken Arrow, Oklahoma

Biology 4533 - Section 1300 - Principles of Evolutionary Biology

Spring 2004 - Wed 12-2:40; C221

Dr. James K. Schooley



COURSE OBJECTIVES: To introduce students to the processes which lead to the evolution of natural systems and a review of current ideas on the principles governing biological evolution.



PREREQUISITES: Ten hours of biological sciences.



FORMAT: Discussion; lecture, student lead activities/presentations, modeling/simulations. Students will be expected to put in significant but appropriate amounts of non-class time to prepare presentations and to complete models and simulations. Each class meeting is the equivalent of one full week of course material, attendance and participation are critical and required. A typical meeting will begin with an activity or presentation lead by a group of students. After a short break we will end with a lecture presenting an overview of the next assignment/reading.



OFFICE HOURS: Hours open for appointments in Tahlequah are Tues 9-11; 4-5 and Thur 9-11; 1-4 in Broken Arrow are Wed 9-11. Appointments can be made for times other than these. My office in Tahlequah is Science 309 and in BA is C127, my e-mail schooley@cherokee.nsuok.edu and my extension 3825. You may also wish to leave messages with the Natural Sciences Office in Science 221 and extension 3800.



TEXTS:

Freeman, Scott and Herron Jon C, 2004. Evolutionary Analysis, 3rd Ed. Pearson Education Inc., Upper Saddle River, NJ. ISBN 0-13-101859-0



Student Companion Website www.prenhall.com/freeman/evolution



GRADING:

Mid Term Exams 55% - covering lectures, readings and activities (simulations, literature reviews, case studies) format may include multiple choice, problem solving, short answer, data analysis, and essay questions. (Exam 1 10%, Exams 2,3,4 15%)



Final Comprehensive Exam 20% - covering all lectures, readings and activities (simulations, literature reviews, case studies) format may include multiple choice, problem solving, short answer, data analysis, and essay questions



Leading Activities 15% - Oral (lecture & discussion) and written presentations to the class on assigned activities (simulations, literature reviews, case studies)



Participation in Class Discussions and Activities 10% - A subjective evaluation of a student's preparation for and participation in class activities and discussions.

Principles of Evolutionary Biology - Tentative Schedule - Spring 2004
Week Date Activity Lecture
1 Jan 14 Introduction to the course A case for evolutionary thinking: understanding HIV - Chp 1
2 Jan 21 #1 - Simulation : Forensic EA The evidence for evolution - Chp 2

Darwinian Natural Selection - Chp 3

3 Jan 28 #2 - Simulation: PhyloStrat

#3 - Simulation: Evodots

EXAM 1 - Chp 1,2,3
4 Feb 2 MONDAY - Degree applications due
4 Feb 4 Review of Exam 1 Mutation and Genetic Variation -Chp 4

Mendelian Genetics in Populations I - Chp 5

5 Feb 11 #4A - Literature review: Genetic redundancy

#4B - Simulation: Frogpond

#5A - Case Study: The Evolution of Human Resistance to Malaria

#5B - Simulation: PopCycle

Mendelian Genetics in Populations II - Chp 6

Evolution at Multiple Loci: Linkage and Sex - Chp 7

6 Feb 18 #6A - Literature review: Founder Effect

#6B - Simulation : Allele Simulation

#7 - Literature review: Why do Bdelloid rotifers reproduce only asexually?

Evolution at Multiple Loci: Quantitative Genetics - Chp 8
7 Feb 25 #8A - Case Study: Natural selection and Darwin's Finches

#8B - Simulation: Bugsville

EXAM 2 - Chps 4-8

8 Mar 3 Exam 2 review Studying Adaptation: Evolutionary Analysis of Form and Function - Chp 9

Sexual Selection - Chp 10

9 Mar 10 #9Literture review: Natural selection

#10A - Literature review: Sexual selection

#10B - Case Study: Female Choice in Widowbirds

Kin Selection and Social Behavior - Chp 11

Aging and other Life History Characters - Chp 12

10 Spring Break
11 Mar 24 #11Case Study: Why do male long-tailed manakins cooperate during courtship?

#12A - Literature review: Is copulation risky for female bed bugs?

#12B - Case Study : Can malaria parasites alter their sex ratios adaptively?

Evolution and Human Health - Chp 13
12 Mar 31 #13 - Case Study: Can pills make us thin? An evolutionary perspective on pharmacotherapy. EXAM 3 - Chps 9-13
13 Apr 7 Review exam 3 Reconstructing Evolutionary Trees - Chp 14

Mechanisms of Speciation - Chp 15

13 Apr 9 Last day to withdraw with a W
14 Apr 14 #15A - Literature review : Speciation

#15B - Literature review : Hybridization

#15C - Literature review : Ecotones

The Origins ofLife and Precambrian Evolution - Chp 16

The Cambrian Explosion and Beyond - Chp 17

15 Apr 21 #16 - Literature review : Organelle evolution

#17A - Literature review : Evolution of dinosaurs and birds

#17B - Literature review : Patterns of extinction at the K-T boundary.

#17C - Literature review : Evolution and mass extinction

Development and Evolution - Chp 18

Human Evolution - Chp 19

16 Apr 28 #18 - Case Study: How did snakes lose their limbs?

#19 - Literature review: Ancestral humans

EXAM 4 - Chps 14-19
17 May 5 FINAL EXAM - 1:00-2:50
17 May 8 Graduation
18 May 9 Mothers Day